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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015895820.1_cds_XP_016447767.1_42494
CDS Infomation

[gene=LOC107772812] [db_xref=GeneID:107772812] [protein=sodium/hydrogen exchanger 6-like] [protein_id=XP_016447767.1] [location=join(88545..88728,90727..90778,90891..90950,91079..91103,91197..91282,91370..91481,99467..99529,99706..99725,99835..99932,100562..100590,100984..101015,101104..101151,101251..101311,101397..101494,101595..101670,101765..101784,101969..102066,102150..102259,104610..104693,104783..104895,105061..105137,105299..105351)] [gbkey=CDS]
Sequence

ATGGAGGATCATCTTCAGATATCTCCGGCCGGGGCAAAAGCAAGTCCAGGGAAAGAGCAA
CAAGCCGCTGGAGTAGGCATACTTCTTCAGATCATGATGCTTGTGCTCTCATTTGTGCTT
GGTCATGTCCTTCGTCGTCATCGCTTTTATTATATTCCTGAAGCCAGTGCCTCTCTTTTA
ATTGGTTTGATTGTAGGAGGATTGGCTAATGTATCAAATACAGAAACAAGCATTAGGGCA
TGGTTTAACTTCCATGAAGAGTTTTTCTTTCTCTTTTTATTGCCACCGATCATATTTCAG
TCAGGATTTAGTCTATCACCTAAACCGTTCTTCTCAAACTTTGGAGCAATTATCACTTTT
GCTATTTTAGGAACTTTCATTGCTTCTATTGTCACAGGCATTCTGGTTTACCTTGGTGGA
GTTACGTATCTCATGTACAAACTTCCATTTGTCGAGTGTCTGATGTTTGGTGCTCTTATA
TCGGCAAGTGATCCTGTCACTGTTCTGTCTATTTTCCAGGAGCTTGGCACAGACGTGAAC
CTATATGCTTTAGTGTTTGGGGAATCTGTTTTAAATGATGCAATGGCAATTTCGTTGTAC
AGGACAATGTCATTGGTGAGAAGCAACATGTCAACTGGTCAAAATTACTTCATGATAACT
GTCCGTTTTTTTGAAACTTTTATGGGCTCCTTGTCAGCTGGTGTTGGAGTTGGATTTGTT
TCTGCTTTGCTTTTTAAATATGCTGGCTTGGATATTGACAATCTTCAGAACTTGGAGAGC
TGTTTGTTTGTCCTCTTTCCATATTTCTCATATATGCTAGCAGAAGGACTTGGTCTCTCT
GGCATAGTGTCTATTTTGTTCACTGGAGTCGTTATGAAGCGCTATACGTACTCAAATCTA
TCAGAAAGTTCACAGCGATTTGTGTCGGCATTCTTTCATCTGATATCATCATTGGCTGAA
ACCTTTGTATTTATATATATGGGATTTGATATCGCAATGGAAAAACATAGCTGGTCCCAT
GTTGGATTTATTTTTTTCTCAATTTTGTTCATTGTGATTGCAAGGGCTGCCAATGTGTTT
GGTTGTGCATATTTGGTGAATCTGGTACGACCTCCACACCGGAAGATACCAGCAAACCAT
CAAAAAGCACTCTGGTACAGTGGTCTTCGAGGCGCGATGGCTTTTGCCCTTGCTTTGCAG
TCAGTCCATGATCTTCCTGAAGGACACGGTCAGACAATATTCACTGCTACCACTGCCATT
GTTGTATTAACGGTTTTGATTATTGGAGGATCAACAGGAACCATGTTAGAAGCCTTGGAA
GTTGTGGGTGATGGTCATGCTGGCTCCTTGGGTGAAACCTTTGAGGGGAACAATGGATAT
ATAGCTCCTTCTTATAGTGATGAATCTTATGATGGTGAATCGTCATCAGGGAACAGGTTC
AGGATGAAACTTAAGGAGTTCCACAAAAGCACGACTTCATTTTCAGCACTGGACAAGAAC
TACCTCACTCCATTCTTTACTACTCAAGGTGGAGATGAAGATGAAGATGAGCCAATTATG
CACAGCTCCAGAAGAGGTGTTTATGATGGCCACAACTGA

Peptide Sequence

PEP ID

XP_016447767.1
PEP Infomation

PREDICTED: sodium/hydrogen exchanger 6-like [Nicotiana tabacum]
Sequence

MEDHLQISPAGAKASPGKEQQAAGVGILLQIMMLVLSFVLGHVLRRHRFYYIPEASASLL
IGLIVGGLANVSNTETSIRAWFNFHEEFFFLFLLPPIIFQSGFSLSPKPFFSNFGAIITF
AILGTFIASIVTGILVYLGGVTYLMYKLPFVECLMFGALISASDPVTVLSIFQELGTDVN
LYALVFGESVLNDAMAISLYRTMSLVRSNMSTGQNYFMITVRFFETFMGSLSAGVGVGFV
SALLFKYAGLDIDNLQNLESCLFVLFPYFSYMLAEGLGLSGIVSILFTGVVMKRYTYSNL
SESSQRFVSAFFHLISSLAETFVFIYMGFDIAMEKHSWSHVGFIFFSILFIVIARAANVF
GCAYLVNLVRPPHRKIPANHQKALWYSGLRGAMAFALALQSVHDLPEGHGQTIFTATTAI
VVLTVLIIGGSTGTMLEALEVVGDGHAGSLGETFEGNNGYIAPSYSDESYDGESSSGNRF
RMKLKEFHKSTTSFSALDKNYLTPFFTTQGGDEDEDEPIMHSSRRGVYDGHN

Transcript Sequence

Gene sequence data has not been registered.